Publications

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Andreas Heinzel, Michael Kammer, Gert Mayer, Roman Reindl-Schwaighofer, Karin Hu, Paul Perco, Susanne Eder, Laszlo Rosivall, Patrick B Mark, Wenjun Ju, Matthias Kretzler, Peter Gilmour, Jonathan M Wilson, Kevin L Duffin, Moustafa Abdalla, Mark I McCarthy, Georg Heinze, Hiddo L Heerspink, Andrzej Wiecek, Maria F Gomez, Rainer Oberbauer, for the BEAt-DKD Consortium (2018). Validation of Plasma Biomarker Candidates for the Prediction of eGFR Decline in Patients With Type 2 Diabetes.
Diabetes care, 1-8, https://doi.org/10.2337/dc18-0532.

Paul Perco, Andreas Heinzel, Johannes Leierer, Stefan Schneeberger, Claudia Bösmüller, Rupert Oberhuber, Silvia Wagner, Franziska Engler, Gert Mayer (2018). Validation of systems biology derived molecular markers of renal donor organ status associated with long term allograft function.
Scientific reports, (8), 1, 6974, https://doi.org/10.1038/s41598-018-25163-8.

Paul Perco, Gert Mayer (2018). Endogenous factors and mechanisms of renoprotection and renal repair.
European journal of clinical investigation, (48), 5, e12914, https://doi.org/10.1111/eci.12914.

Project Project

Paul Perco, Gert Mayer (2018). Molecular, histological, and clinical phenotyping of diabetic nephropathy: valuable complementary information?.
Kidney international, (93), 2, 308–310, https://doi.org/10.1016/j.kint.2017.10.026.

Prathibha R. Gajjala, Vera Jankowski, Georg Heinze, Grzegorz Bilo, Alberto Zanchetti, Heidi Noels, Elisa Liehn, Paul Perco, Anna Schulz, Christian Delles, Felix Kork, Erik Biessen, Krzysztof Narkiewicz, Kalina Kawecka-Jaszcz, Juergen Floege, Davide Soranna, Walter Zidek, Joachim Jankowski (2017). Proteomic-Biostatistic Integrated Approach for Finding the Underlying Molecular Determinants of Hypertension in Human Plasma.
Hypertension, (70), 2, 412–419, https://doi.org/10.1161/HYPERTENSIONAHA.116.08906.

Gert Mayer, Hiddo J L Heerspink, Constantin Aschauer, Andreas Heinzel, Georg Heinze, Alexander Kainz, Judith Sunzenauer, Paul Perco, Dick de Zeeuw, Peter Rossing, Michelle Pena, Rainer Oberbauer, for the SYSKID Consortium (2017). Systems Biology-Derived Biomarkers to Predict Progression of Renal Function Decline in Type 2 Diabetes.
Diabetes care, (40), 3, 391–397, https://doi.org/10.2337/dc16-2202.

Constantin Aschauer^*, Paul Perco^*, Andreas Heinzel, Judith Sunzenauer, Rainer Oberbauer (2017). Positioning of Tacrolimus for the Treatment of Diabetic Nephropathy Based on Computational Network Analysis.
PloS one, (12), 1, e0169518, https://doi.org/10.1371/journal.pone.0169518.

Selma Gogalic, Ursula Sauer, Sara Doppler, Andreas Heinzel, Paul Perco, Arno Lukas, Guy Simpson, Hardev Pandha, Andras Horvath, Claudia Preininger (2016). Validation of a protein panel for the noninvasive detection of recurrent non-muscle invasive bladder cancer.
Biomarkers, (22), 7, 674–681, https://doi.org/10.1080/1354750X.2016.1276628.

Bernd Mayer, Andreas Heinzel, Arno Lukas, Paul Perco (2016). Predictive Biomarkers for Linking Disease Pathology and Drug Effect.
Current pharmaceutical design, (23), 1, 29–54, https://doi.org/10.2174/1381612822666161006153639.

Peter Andorfer, Alexander Heuwieser, Andreas Heinzel, Arno Lukas, Bernd Mayer, Paul Perco (2016). Vascular endothelial growth factor A as predictive marker for mTOR inhibition in relapsing high-grade serous ovarian cancer.
BMC systems biology, (10), 33.

Johannes Leierer, Michael Rudnicki, Susie-Jane Braniff, Paul Perco, Christian Koppelstaetter, Irmgard Mühlberger, Susanne Eder, Julia Kerschbaum, Christoph Schwarzer, Andrea Schroll, Günter Weiss, Stefan Schneeberger, Silvia Wagner, Alfred Königsrainer, Georg A Böhmig, Gert Mayer (2016). Metallothioneins and renal ageing.
Nephrology, dialysis, transplantation, (31), 9, 1444–52, https://doi.org/10.1093/ndt/gfv451.

Michael Rudnicki, Paul Perco, Barbara D’Haene, Johannes Leierer, Andreas Heinzel, Irmgard Mühlberger, Ninella Schweibert, Judith Sunzenauer, Heinz Regele, Andreas Kronbichler, Pieter Mestdagh, Jo Vandesompele, Bernd Mayer, Gert Mayer (2015). Renal microRNA- and RNA-profiles in progressive chronic kidney disease.
European journal of clinical investigation, (46), 3, 213–26, https://doi.org/10.1111/eci.12585.

Marine De Paoli, Paul Perco, Irmgard Mühlberger, Arno Lukas, Hardev Pandha, Richard Morgan, Gui Jie Feng, Christophe Marquette (2015). Disease map-based biomarker selection and pre-validation for bladder cancer diagnostic.
Biomarkers, (20), 5, 328–337, https://doi.org/10.3109/1354750X.2015.1068867.

Andreas Heinzel, Irmgard Mühlberger, Gil Stelzer, Doron Lancet, Rainer Oberbauer, Maria Martin, Paul Perco (2015). Molecular disease presentation in diabetic nephropathy.
Nephrology, dialysis, transplantation, (30 Suppl 4), iv17–25, https://doi.org/10.1093/ndt/gfv267.

Hiddo J. Lambers Heerspink, Rainer Oberbauer, Paul Perco, Andreas Heinzel, Georg Heinze, Gert Mayer, Bernd Mayer (2015). Drugs meeting the molecular basis of diabetic kidney disease: bridging from molecular mechanism to personalized medicine.
Nephrology, dialysis, transplantation, (30 Suppl 4), iv105–112, https://doi.org/10.1093/ndt/gfv210.

Michelle J. Pena, Andreas Heinzel, Georg Heinze, Alaa Alkhalaf, Stephan J L Bakker, Tri Q. Nguyen, Roel Goldschmeding, Henk J G Bilo, Paul Perco, Bernd Mayer, Dick de Zeeuw, Hiddo J. Lambers Heerspink (2015). A panel of novel biomarkers representing different disease pathways improves prediction of renal function decline in type 2 diabetes.
PloS one, (10), 5, e0120995, https://doi.org/10.1371/journal.pone.0120995.

Akshay Bhat, Andreas Heinzel, Bernd Mayer, Paul Perco, Irmgard Mühlberger, Holger Husi, Axel S Merseburger, Jerome Zoidakis, Antonia Vlahou, Joost P Schanstra, Harald Mischak, Vera Jankowski (2015). Protein interactome of muscle invasive bladder cancer.
PloS one, (10), 1, e0116404, https://doi.org/10.1371/journal.pone.0116404.

Hannes Neuwirt, Paul Perco, Alexander Kainz, Irmgard Mühlberger, Johannes Leierer, Susi J Braniff, Bernd Mayer, Gert Mayer, Michael Rudnicki (2014). A 3-biomarker-panel predicts renal outcome in patients with proteinuric renal diseases.
BMC Med Genomics, (7), 75, https://doi.org/10.1186/s12920-014-0075-8.

Andreas Heinzel, Paul Perco, Gert Mayer, Rainer Oberbauer, Arno Lukas, Bernd Mayer (2014). From molecular signatures to predictive biomarkers: modeling disease pathophysiology and drug mechanism of action.
Frontiers in cell and developmental biology, (2), 37, https://doi.org/10.3389/fcell.2014.00037.

Filippo Genovese, Alessandra Gualandi, Laura Taddia, Gaetano Marverti, Silvia Pirondi, Chiara Marraccini, Paul Perco, Michela Pela, Remo Guerrini, Maria Rosaria Amoroso, Franca Esposito, Andrea Martello, Glauco Ponterini, Domenico D’Arca, Maria Paola Costi (2014). Mass spectrometric-bioinformatic identification of a protein subset that characterizes the cellular activity of anticancer peptides.
Journal of Proteome Research, (13), 11, 5250–5261, https://doi.org/10.1021/pr500510v.

Julia Wilflingseder, Judith Sunzenauer, Eva Toronyi, Andreas Heinzel, Alexander Kainz, Bernd Mayer, Paul Perco, Gabor Telkes, Robert M. Langer, Rainer Oberbauer (2014). Molecular pathogenesis of post-transplant acute kidney injury: assessment of whole-genome mRNA and miRNA profiles.
PloS one, (9), 8, e104164, https://doi.org/10.1371/journal.pone.0104164.

Andreas Heinzel, Irmgard Mühlberger, Raul Fechete, Bernd Mayer, Paul Perco (2014). Functional molecular units for guiding biomarker panel design.
Methods in molecular biology, (1159), 12, 109–33, https://doi.org/10.1007/978-1-4939-0709-0_7.

Holger Husi, Tom Van Agtmael, William Mullen, Ferdinand H Bahlmann, Joost P Schanstra, Antonia Vlahou, Christian Delles, Paul Perco, Harald Mischak (2014). Proteome-based systems biology analysis of the diabetic mouse aorta reveals major changes in fatty acid biosynthesis as potential hallmark in diabetes mellitus-associated vascular disease.
Circulation. Cardiovascular genetics, (7), 2, 161–70, https://doi.org/10.1161/CIRCGENETICS.113.000196.

Raul Fechete, Andreas Heinzel, Johannes Söllner, Paul Perco, Arno Lukas, Bernd Mayer (2013). Using information content for expanding human protein coding gene interaction networks.
J Comput Sci Syst Biol, (6), 073–082.

Julia Wilflingseder, Heinz Regele, Paul Perco, Alexander Kainz, Afschin Soleiman, Ferdinand Mühlbacher, Bernd Mayer, Rainer Oberbauer (2013). miRNA profiling discriminates types of rejection and injury in human renal allografts.
Transplantation, (95), 6, 835–41, https://doi.org/10.1097/TP.0b013e318280b385.

Andreas Heinzel, Raul Fechete, Irmgard Muhlberger, Paul Perco, Bernd Mayer, Arno Lukas (2013). Molecular models of the cardiorenal syndrome.
Electrophoresis, (34), 11, 1649–1656, https://doi.org/10.1002/elps.201200642.

Justyna Siwy, Carlamaria Zoja, Julie Klein, Ariela Benigni, Wiliam Mullen, Bernd Mayer, Harald Mischak, Joachim Jankowski, Robert Stevens, Antonia Vlahou, Sophia Kossida, Paul Perco, Ferdinand H. Bahlmann (2012). Evaluation of the Zucker diabetic fatty (ZDF) rat as a model for human disease based on urinary peptidomic profiles.
PloS one, (7), 12, e51334, https://doi.org/10.1371/journal.pone.0051334.

Michael Rudnicki, Paul Perco, Hannes Neuwirt, Susie-Jane Noppert, Johannes Leierer, Judith Sunzenauer, Susanne Eder, Carlamaria Zoja, Kathrin Eller, Alexander R Rosenkranz, Gerhard A Müller, Bernd Mayer, Gert Mayer (2012). Increased renal versican expression is associated with progression of chronic kidney disease.
PloS one, (7), 9, e44891, https://doi.org/10.1371/journal.pone.0044891.

Andreas Heinzel, Raul Fechete, Johannes Söllner, Paul Perco, Georg Heinze, Rainer Oberbauer, Gert Mayer, Arno Lukas, Bernd Mayer (2012). Data Graphs for Linking Clinical Phenotype and Molecular Feature Space.
International Journal of Systems Biology and Biomedical Technologies, (1), 1, 11–25, https://doi.org/10.4018/ijsbbt.2012010102.

Project Project

Irmgard Mühlberger, Konrad Mönks, Raul Fechete, Gert Mayer, Rainer Oberbauer, Bernd Mayer, Paul Perco (2012). Molecular Pathways and Crosstalk Characterizing the Cardiorenal Syndrome.
OMICS, (16), 3, 105–112, https://doi.org/10.1089/omi.2011.0121.

Gil Stelzer, Irina Dalah, Tsippi Iny Stein, Yigeal Satanower, Naomi Rosen, Noam Nativ, Danit Oz-Levi, Tsviya Olender, Frida Belinky, Iris Bahir, Hagit Krug, Paul Perco, Bernd Mayer, Eugene Kolker, Marilyn Safran, Doron Lancet (2011). In-silico human genomics with GeneCards.
Human genomics, (5), 6, 709–17, https://doi.org/10.1186/1479-7364-5-6-709.

Andreas Bernthaler, Konrad Mönks, Irmgard Mühlberger, Bernd Mayer, Paul Perco, Rainer Oberbauer (2011). Linking molecular feature space and disease terms for the immunosuppressive drug rapamycin.
Molecular bioSystems, (7), 10, 2863–2871, https://doi.org/10.1039/c1mb05187c.

Raul Fechete, Andreas Heinzel, Paul Perco, Konrad Monks, Johannes Sollner, Gil Stelzer, Susanne Eder, Doron Lancet, Rainer Oberbauer, Gert Mayer, Bernd Mayer (2011). Mapping of molecular pathways, biomarkers and drug targets for diabetic nephropathy.
Proteomics. Clinical applications, (5), 5-6, 354–66, https://doi.org/10.1002/prca.201000136.

Mariam Anees, Peter Horak, Ahmed El-Gazzar, Martin Susani, Georg Heinze, Paul Perco, Massimo Loda, Rosina Lis, Michael Krainer, William K. Oh (2011). Recurrence-free survival in prostate cancer is related to increased stromal TRAIL expression.
Cancer, (117), 6, 1172–1182, https://doi.org/10.1002/cncr.25504.

Konrad Monks, Andreas Bernthaler, Irmgard Muhlberger, Bernd Mayer, Rainer Oberbauer, Paul Perco (2011). Mycophenolate Mofetil Associated Molecular Profiles and Diseases.
J Comput Sci Syst Biol, (4), 1, 001–006, https://doi.org/10.4172/jcsb.1000068.

Irmgard Mühlberger, Julia Wilflingseder, Andreas Bernthaler, Raul Fechete, Arno Lukas, Paul Perco (2011). Computational analysis workflows for Omics data interpretation.
Methods in molecular biology, (719), 1, 379–97, https://doi.org/10.1007/978-1-61779-027-0_17.

Martin Wiesinger, Martin Haiduk, Marco Behr, Henrique Lopes de Abreu Madeira, Gernot Glöckler, Paul Perco, Arno Lukas (2011). Data and knowledge management in cross-Omics research projects.
Methods in molecular biology, (719), 97–111, https://doi.org/10.1007/978-1-61779-027-0_4.

Konrad Mönks, Irmgard Mühlberger, Andreas Bernthaler, Raul Fechete, Paul Perco, Rudolf Freund, Arno Lukas, Bernd Mayer (2011). Computational Reconstruction of Protein Interaction Networks.
in Applied Statistics for Network Biology: Methods in Systems Biology, (1), 155–180, https://doi.org/10.1002/9783527638079.ch8.

Irmgard Mühlberger, Konrad Mönks, Andreas Bernthaler, Christine Jandrasits, Bernd Mayer, Gert Mayer, Rainer Oberbauer, Paul Perco (2010). Integrative bioinformatics analysis of proteins associated with the cardiorenal syndrome.
International journal of nephrology, (2011), 809378, https://doi.org/10.4061/2011/809378.

Paul Perco, Rainer Oberbauer (2010). Integrative analysis of -omics data and histologic scoring in renal disease and transplantation: Renal histogenomics.
Seminars in Nephrology, (30), 5, 520–530, https://doi.org/10.1016/j.semnephrol.2010.07.009.

Raul Fechete, Susanne Barth, Tsviya Olender, Andreea Munteanu, Andreas Bernthaler, Aron Inger, Paul Perco, Arno Lukas, Doron Lancet, Jindrich Cinatl, Martin Michaelis, Bernd Mayer (2010). Synthetic lethal hubs associated with vincristine resistant neuroblastoma.
Molecular BioSystems, (7), 1, 200–14, https://doi.org/10.1039/c0mb00082e.

Andreas Gleiss, Fatima Sanchez-Cabo, Paul Perco, Dan Tong, Georg Heinze (2010). Adaptive trimmed t-statistics for identifying predominantly high expression in a microarray experiment.
Statistics in Medicine, (30), 1, 52–61, https://doi.org/10.1002/sim.4093.

Reka Korbely, Julia Wilflingseder, Paul Perco, Alexander Kainz, Robert M. Langer, Bernd Mayer, Rainer Oberbauer (2010). Molecular biomarker candidates of acute kidney injury in zero-hour renal transplant needle biopsies.
Transplant International, (24), 2, 143–149, https://doi.org/10.1111/j.1432-2277.2010.01162.x.

Alexander Kainz, Julia Wilflingseder, Christa Mitterbauer, Maria Haller, Christopher Burghuber, Paul Perco, Robert M Langer, Georg Heinze, Rainer Oberbauer (2010). Steroid pretreatment of organ donors to prevent postischemic renal allograft failure: a randomized, controlled trial.
Annals of internal medicine, (153), 4, 222–30, https://doi.org/10.7326/0003-4819-153-4-201008170-00003.

Paul Perco, Irmgard Mühlberger, Gert Mayer, Rainer Oberbauer, Arno Lukas, Bernd Mayer (2010). Linking transcriptomic and proteomic data on the level of protein interaction networks.
Electrophoresis, (31), 11, 1780–1789, https://doi.org/10.1002/elps.200900775.

Ahmed El-Gazzar, Paul Perco, Eva Eckelhart, Mariam Anees, Veronika Sexl, Bernd Mayer, Yanxin Liu, Wolfgang Mikulits, Reinhard Horvat, Thomas Pangerl, Dexian Zheng, Michael Krainer (2010). Natural Immunity Enhances the Activity of a DR5 Agonistic Antibody and Carboplatin in the Treatment of Ovarian Cancer.
Molecular Cancer Therapeutics, (9), 4, 1007–1018, https://doi.org/10.1158/1535-7163.MCT-09-0933.

Ahmed El-Gazzar, Michael Wittinger, Paul Perco, Mariam Anees, Reinhard Horvat, Wolfgang Mikulits, Thomas W. Grunt, Bernd Mayer, Michael Krainer (2010). The role of c-FLIPL in ovarian cancer: Chaperoning tumor cells from immunosurveillance and increasing their invasive potential.
Gynecologic Oncology, (117), 3, 451–459, https://doi.org/10.1016/j.ygyno.2010.02.024.

Julia Wilflingseder, Alexander Kainz, Irmgard Mühlberger, Paul Perco, Robert Langer, Ivan Kristo, Bernd Mayer, Rainer Oberbauer (2010). Impaired metabolism in donor kidney grafts after steroid pretreatment.
Transplant International, (23), 8, 796–804, https://doi.org/10.1111/j.1432-2277.2010.01053.x.

Franck Molina, Matthias Dehmer, Paul Perco, Armin Graber, Mark Girolami, Goce Spasovski, Joost P. Schanstra, Antonia Vlahou (2010). Systems biology: Opening new avenues in clinical research.
Nephrology Dialysis Transplantation, (25), 4, 1015–1018, https://doi.org/10.1093/ndt/gfq033.

Irmgard Mühlberger, Paul Perco, Raul Fechete, Bernd Mayer, Rainer Oberbauer (2009). Biomarkers in renal transplantation ischemia reperfusion injury.
Transplantation, (88), 3 Suppl, S14–S19, https://doi.org/10.1097/TP.0b013e3181af65b5.

Julia Wilflingseder, Paul Perco, Alexander Kainz, Christoph Schwarz, Reka Korbely, Bernd Mayer, Rainer Oberbauer (2009). Biocompatibility of peritoneal dialysis solutions determined by genomics of human leucocytes: a cross-over study.
NDT plus, (2), 6, 510–2, https://doi.org/10.1093/ndtplus/sfp129.

Herbert Schramek, Rita Sarközi, Christina Lauterberg, Andreas Kronbichler, Markus Pirklbauer, Rudolf Albrecht, Susie-Jane Noppert, Paul Perco, Michael Rudnicki, Frank M Strutz, Gert Mayer (2009). Neuropilin-1 and neuropilin-2 are differentially expressed in human proteinuric nephropathies and cytokine-stimulated proximal tubular cells.
Laboratory Investigation, (89), 11, 1304–1316, https://doi.org/10.1038/labinvest.2009.96.

Andreas Bernthaler, Irmgard Mühlberger, Raul Fechete, Paul Perco, Arno Lukas, Bernd Mayer (2009). A dependency graph approach for the analysis of differential gene expression profiles.
Molecular bioSystems, (5), 12, 1720–31, https://doi.org/10.1039/b903109j.

Peter V. Hauser, Paul Perco, Irmgard Mühlberger, Jeffrey Pippin, Mary Blonski, Bernd Mayer, Charles E. Alpers, Rainer Oberbauer, Stuart J. Shankland (2009). Microarray and bioinformatics analysis of gene expression in experimental membranous nephropathy.
Nephron - Experimental Nephrology, (112), 2, 43–58, https://doi.org/10.1159/000213505.

Paul Perco, Alexander Kainz, Julia Wilflingseder, Afschin Soleiman, Bernd Mayer, Rainer Oberbauer (2009). Histogenomics: association of gene expression patterns with histological parameters in kidney biopsies.
Transplantation, (87), 2, 290–5, https://doi.org/10.1097/TP.0b013e318191b4c0.

Michael Rudnicki^*, Paul Perco^*, Julia Enrich, Susanne Eder, Dorothea Heininger, Andreas Bernthaler, Martin Wiesinger, Rita Sarkozi, Susie-Jane Noppert, Herbert Schramek, Bernd Mayer, Rainer Oberbauer, Gert Mayer (2009). Hypoxia response and VEGF-A expression in human proximal tubular epithelial cells in stable and progressive renal disease.
Laboratory investigation, (89), 3, 337–46, https://doi.org/10.1038/labinvest.2008.158.

Julia Wilflingseder, Alexander Kainz, Paul Perco, Reka Korbely, Bernd Mayer, Rainer Oberbauer (2008). Molecular predictors for anaemia after kidney transplantation.
Nephrology Dialysis Transplantation, (24), 3, 1015–1023, https://doi.org/10.1093/ndt/gfn683.

Julia Wilflingseder, Paul Perco, Alexander Kainz, Reka Korbely, Bernd Mayer, Rainer Oberbauer (2008). Biocompatibility of haemodialysis membranes determined by gene expression of human leucocytes: A crossover study.
European Journal of Clinical Investigation, (38), 12, 918–924, https://doi.org/10.1111/j.1365-2362.2008.02050.x.

Rita Sarközi, Paul Perco, Kathrin Hochegger, Julia Enrich, Martin Wiesinger, Markus Pirklbauer, Susanne Eder, Michael Rudnicki, Alexander R Rosenkranz, Bernd Mayer, Gert Mayer, Herbert Schramek (2008). Bortezomib-induced survival signals and genes in human proximal tubular cells.
The Journal of pharmacology and experimental therapeutics, (327), 3, 645–56, https://doi.org/10.1124/jpet.108.142604.

Thomas Lechleitner, Frederik Klauser, Thomas Seppi, Judith Lechner, Paul Jennings, Paul Perco, Bernd Mayer, Doris Steinmuller-Nethl, Johannes Preiner, Peter Hinterdorfer, Martin Hermann, Erminald Bertel, Kristian Pfaller, Walter Pfaller (2008). The surface properties of nanocrystalline diamond and nanoparticulate diamond powder and their suitability as cell growth support surfaces.
Biomaterials, (29), 32, 4275–4284, https://doi.org/10.1016/j.biomaterials.2008.07.023.

Martin Bodingbauer, Reinhard Kramar, Thomas Wekerle, Georg A Böhmig, Gerlinda Berlakovich, Marcus D Saemann, R Steininger, Paul Perco, Rainer Oberbauer, Walter Horl, Ferdinand Mühlbacher (2008). Present status at the Vienna Transplantation Center after four thousand renal transplantations.
Clinical transplants, 69–80.

Paul Perco, Rainer Oberbauer (2008). Kidney injury molecule-1 as a biomarker of acute kidney injury in renal transplant recipients.
Nat Clin Pract Nephrol, (4), 7, 362–363, https://doi.org/10.1038/ncpneph0828.

Christian Koppelstaetter, Gabriele Schratzberger, Paul Perco, Johannes Hofer, Walter Mark, Robert Öllinger, Rainer Oberbauer, Christoph Schwarz, Christa Mitterbauer, Alexander Kainz, Henryk Karkoszka, Andrzej Wiecek, Bernd Mayer, Gert Mayer (2008). Markers of cellular senescence in zero hour biopsies predict outcome in renal transplantation.
Aging cell, (7), 4, 491–7.

Paul Perco, Julia Wilflingseder, Andreas Bernthaler, Martin Wiesinger, Michael Rudnicki, Barbara Wimmer, Bernd Mayer, Rainer Oberbauer (2008). Biomarker candidates for cardiovascular disease and bone metabolism disorders in chronic kidney disease: A systems biology perspective.
Journal of Cellular and Molecular Medicine, (12), 4, 1177–1187, https://doi.org/10.1111/j.1582-4934.2008.00280.x.

Johannes Söllner, Rainer Grohmann, Ronald Rapberger, Paul Perco, Arno Lukas, Bernd Mayer (2008). Analysis and prediction of protective continuous B-cell epitopes on pathogen proteins.
Immunome Research, (4), 1, 1–17, https://doi.org/10.1186/1745-7580-4-1.

Ronald Rapberger, Paul Perco, Cornelia Sax, Thomas Pangerl, Christian Siehs, Dietmar Pils, Andreas Bernthaler, Arno Lukas, Bernd Mayer, Michael Krainer (2008). Linking the ovarian cancer transcriptome and immunome.
BMC systems biology, (2), 2, https://doi.org/10.1186/1752-0509-2-2.

Sonia Aydin, Sara Signorelli, Thomas Lechleitner, Michael Joannidis, Clara Pleban, Paul Perco, Walter Pfaller, Paul Jennings (2007). Influence of microvascular endothelial cells on transcriptional regulation of proximal tubular epithelial cells.
American journal of physiology. Cell physiology, (294), 2, C543–54, https://doi.org/10.1152/ajpcell.00307.2007.

Kathrin Hochegger, Paul Perco, Julia Enrich, Bernd Mayer, Gert Mayer, Alexander R. Rosenkranz, Michael Rudnicki (2007). In vitro - Transcriptional response of polymorphonuclear leukocytes following contact with different antigens.
European Journal of Clinical Investigation, (37), 11, 860–869, https://doi.org/10.1111/j.1365-2362.2007.01872.x.

Alexander Platzer, Paul Perco, Arno Lukas, Bernd Mayer (2007). Characterization of protein-interaction networks in tumors.
BMC bioinformatics, (8), 224, https://doi.org/10.1186/1471-2105-8-224.

Project Project

Alexander Kainz, Paul Perco, Bernd Mayer, Afschin Soleiman, Rudolf Steininger, Gert Mayer, Christa Mitterbauer, Christoph Schwarz, Timothy W Meyer, Rainer Oberbauer (2007). Gene-expression profiles and age of donor kidney biopsies obtained before transplantation distinguish medium term graft function.
Transplantation, (83), 8, 1048–54.

Michael Rudnicki, Susanne Eder, Paul Perco, Julia Enrich, K Scheiber, Christian Koppelstatter, Gebriela Schratzberger, Bernd Mayer, Rainer Oberbauer, Timothy W Meyer, Gert Mayer (2006). Gene expression profiles of human proximal tubular epithelial cells in proteinuric nephropathies.
Kidney international, (71), 4, 325–35, https://doi.org/10.1038/sj.ki.5002043.

Paul Perco, Clara Pleban, Alexander Kainz, Arno Lukas, Bernd Mayer, Rainer Oberbauer (2006). Gene expression and biomarkers in renal transplant ischemia reperfusion injury.
Transplant International, (20), 1, 2–11, https://doi.org/10.1111/j.1432-2277.2006.00376.x.

Paul Perco, Clara Pleban, Alexander Kainz, Arno Lukas, Gert Mayer, Bernd Mayer, Rainer Oberbauer (2006). Protein biomarkers associated with acute renal failure and chronic kidney disease.
European journal of clinical investigation, (36), 11, 753–763, https://doi.org/10.1111/j.1365-2362.2006.01729.x.

Paul Perco, Ronald Rapberger, Christian Siehs, Arno Lukas, Rainer Oberbauer, Gert Mayer, Bernd Mayer (2006). Transforming omics data into context: bioinformatics on genomics and proteomics raw data.
Electrophoresis, (27), 13, 2659–75, https://doi.org/10.1002/elps.200600064.

Paul Perco, Peter Blaha, Alexander Kainz, Bernd Mayer, Peter Hauser, Thomas Wekerle, Rainer Oberbauer (2006). Molecular signature of mice T lymphocytes following tolerance induction by allogeneic BMT and CD40-CD40L costimulation blockade.
Transplant International, (19), 2, 146–157, https://doi.org/10.1111/j.1432-2277.2005.00241.x.

Shao-Shen Huang, Debra L Fulton, David J Arenillas, Paul Perco, Shannan Ho-Sui, James R Mortimer, Wyeth W Wasserman (2006). Identification of over-represented combinations of transcription factor binding sites in sets of co-expressed genes.
Advances in Bioinformatics and Computational Biology, (3), 247–56.

Peter Hauser, Alexander Kainz, Paul Perco, Helga Bergmeister, Christa Mitterbauer, Christoph Schwarz, Heinz M Regele, Bernd Mayer, Timothy W Meyer, Rainer Oberbauer (2005). Transcriptional response in the unaffected kidney after contralateral hydronephrosis or nephrectomy.
Kidney international, (68), 6, 2497–507, https://doi.org/10.1111/j.1523-1755.2005.00725.x.

Christian Koppelstaetter, Paul Jennings, Kathrin Hochegger, Paul Perco, Rudolf Ischia, Henryk Karkoszka, Gert Mayer (2005). Effect of tissue fixatives on telomere length determination by quantitative PCR.
Mechanisms of Ageing and Development, (126), 12, 1331–1333, https://doi.org/10.1016/j.mad.2005.08.003.

Paul Perco, Alexander Kainz, Gert Mayer, Arno Lukas, Rainer Oberbauer, Bernd Mayer (2005). Detection of coregulation in differential gene expression profiles.
Bio Systems, (82), 3, 235–47, https://doi.org/10.1016/j.biosystems.2005.08.001.

Alexander Kainz, Christa Mitterbauer, Peter Hauser, Christoph Schwarz, Heinz M. Regele, Gabriela Berlakovich, Gert Mayer, Paul Perco, Bernd Mayer, Timothy W. Meyer, Rainer Oberbauer (2004). Alterations in gene expression in cadaveric vs. live donor kidneys suggest impaired tubular counterbalance of oxidative stress at implantation.
American Journal of Transplantation, (4), 10, 1595–1604, https://doi.org/10.1111/j.1600-6143.2004.00554.x.

Peter Hauser, Christoph Schwarz, Christa Mitterbauer, Heinz M Regele, Ferdinand Mühlbacher, Gert Mayer, Paul Perco, Bernd Mayer, Timothy W Meyer, Rainer Oberbauer (2004). Genome-wide gene-expression patterns of donor kidney biopsies distinguish primary allograft function.
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Paul Perco, Chao Peng Shao, Wolfgang Richard Mayr, Simon Panzer, Tobias J. Legler (2003). Testing for the D zygosity with three different methods revealed altered Rhesus boxes and a new weak D type.
Transfusion, (43), 3, 335–339, https://doi.org/10.1046/j.1537-2995.2003.00313.x.

Tobias J. Legler, J. H. Maas, M. Kohler, T. Wagner, G. L. Daniels, Paul Perco, Simon Panzer (2001). RHD sequencing: A new tool for decision making on transfusion therapy and provision of Rh prophylaxis.
Transfusion Medicine, (11), 5, 383–388, https://doi.org/10.1046/j.1365-3148.2001.00327.x.